Processing a Run¶

This page describes how to submit a pipeline run for processing.

Step-by-step Guide¶

1. Navigate to the Run Detail Page¶

Navigate to the detail page of the run you wish to process.

2. Run a config validation¶

Before processing it is recommended to check that the configuration file is valid. This is done by scrolling down to the config file card on the page and selecting the Validate Config option accessed by clicking the three dots menu button. Doing this will check if the configuration contains any errors prior to processing.

Feedback will be provided on whether the configuration file is valid. In the event of an error, this can be corrected by using the edit option found in the same menu.

3. Confirm Processing¶

With a successful configuration validation, scroll back up to the top of the page and click the Process Run button. This will open a modal window for you to confirm processing.

For a newly initialised run, the only option that requires attention is whether to toggle the Debug Log Output on. This can be helpful if processing a new set of images which the pipeline hasn't seen before.

If you are processing a run that has errored in the initial processing then the Full Re-Run option should be toggled to On.

Once ready, press the Schedule Run button which will send the run to the queue for processing.

Monitoring the Run¶

You can check the status of the run by refreshing the run detail page and seeing if the Run Status field has been updated. You can also check the log output by scrolling down to the log file card found below the configuration file.

There is currently no automated notification on completion or errors.

Full Re-Run¶

A full re-run will be required if the run configuration needs to be changed, or in the event that an initial run has errored.

Adding Images to a Run¶

See the dedicated documentation page here.